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/home/kevin/Documents/PYLikeC/currents.h

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00001 #include "pga.h"
00002 
00003 #define MAX_DAT 1000
00004 
00005 #define NEQ 18
00006 
00007 #define MAX_SPIKES 100000
00008 
00009 struct input_data
00010 {
00011    int position;            /* the last i accessed */
00012    int filled;              /* how many injections */
00013    double data[MAX_DAT][2]; /* current start time [i] current stop time [i] */
00014    double params[NUM_PARAMS];
00015 };
00016 
00017 double na_m_inf(double v);
00018 
00019 double na_h_deriv(double v, double na_h);
00020 
00021 double kd_n_deriv(double v, double kd_n);
00022 
00023 double a_bfast_deriv(double v, double a_bfast);
00024 
00025 double a_a_deriv(double v, double a_a);
00026 
00027 double a_bslow_deriv(double v, double a_bslow);
00028 
00029 double h_r_deriv(double v, double h_r);
00030 
00031 double kv3_n_deriv(double v, double kv3_n); 
00032 
00033 double kv3_h_deriv(double kv3_h, double kv3_n);
00034 
00035 double ca_i_deriv(double tot_ca_curr, double ca_i);
00036 
00037 double ca_reverse(double ca_i);
00038 
00039 double k_a_deriv(double v, double k_a, double ca_i);
00040 
00041 double k_ca_a_deriv(double v, double ca_i,  double k_ca_a);
00042 
00043 double k_ca_b_deriv(double ca_i,  double k_ca_b);
00044 
00045 double ahp_a_deriv(double ca_i, double ahp_a);
00046 
00047 double ca_f1_a_deriv(double v, double ca_f1_a);
00048 
00049 double ca_f1_b_deriv(double v, double ca_f1_b);
00050 
00051 double ca_f2_a_deriv(double v, double ca_f2_a);
00052 
00053 double ca_s_a_deriv(double v, double ca_s_a);
00054 
00055 int stim(double t1, struct input_data *model_data_ptr);
00056 
00057 int get_delay(double spike_times[], 
00058                 int model_spike_count, 
00059                 double exp_time[], 
00060                 int exp_delay_count, 
00061                 double model_delay[]
00062                 );
00063 
00064 void fill_struct(struct input_data *pulse_train_ptr);
00065 
00066 int get_exp_delay(double *exp_time_ptr, double *exp_delay_ptr);
00067 
00068 int model(struct input_data *model_data_ptr, double spike_times[]);
00069 
00070 size_t model_slow_wave(struct input_data *model_data_ptr, double ** wave);
00071 
00072 void model_wave_and_spikes(
00073                 struct input_data *model_data_ptr, 
00074                 double ** wave_ptr, size_t * wave_size, 
00075                 double ** spike_ptr, size_t * spike_size);
00076 

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